Basic Information
Locus ID:
nbisL1-mrna-17329
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000000F_pilon | 3902657 | 3907303 | - | nbisL1-mrna-17329 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 87,449.65 Da | 50.66 | 82.73 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 16 | 174 | 6.70884E-55 | - |
| Pfam | PF00069 | Protein kinase domain | 474 | 726 | 2.9E-39 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 17 | 149 | 1.5E-6 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 450 | 732 | 9.17E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 150 | 4.27E-5 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 3 | 171 | 1.7E-8 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 452 | 545 | 1.8E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 546 | 751 | 8.0E-48 | - |
| SMART | SM00220 | serkin_6 | 473 | 736 | 1.3E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 740 | 35.721577 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 591 | 603 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 337 | - | - |
| Coils | Coil | Coil | 365 | 385 | - | - |
| Coils | Coil | Coil | 399 | 451 | - | - |
| Coils | Coil | Coil | 332 | 359 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_038696897.1 | U-box domain-containing protein 35-like [Tripterygium wilfordii] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J0ZPW6 | U-box domain-containing protein 35 OS=Herrania umbratica OX=108875 GN=LOC110411043 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology