Basic Information
Locus ID:
nbisL1-mrna-17248
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
BAG family molecular chaperone regulator
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000000F_pilon | 3300878 | 3304163 | + | nbisL1-mrna-17248 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 26,140.78 Da | 40.69 | 83.96 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02179 | BAG domain | 155 | 214 | 5.5E-7 | IPR003103 |
| Pfam | PF00240 | Ubiquitin family | 72 | 129 | 3.1E-9 | IPR000626 |
| SUPERFAMILY | SSF63491 | BAG domain | 115 | 214 | 5.49E-12 | IPR036533 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 51 | 133 | 8.75E-15 | IPR029071 |
| Gene3D | G3DSA:1.20.58.120 | BAG domain | 131 | 226 | 6.7E-26 | IPR036533 |
| Gene3D | G3DSA:3.10.20.90 | - | 60 | 130 | 9.9E-21 | - |
| SMART | SM00213 | ubq_7 | 59 | 131 | 2.6E-4 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 59 | 129 | 13.641498 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07220.1 | BCL-2-associated athanogene 3. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. | 0 |
| RefSeq | XP_042943829.1 | BAG family molecular chaperone regulator 2-like [Carya illinoinensis] | 0 |
| Q9LYP4 | BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana OX=3702 GN=BAG3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2NY49 | Ubiquitin-like domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg25025, jg38766 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30075900 |
| Arecaceae | Cocos nucifera | 2 | scaffold000682G000020, scaffold001635G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103716262 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.1749.V1.1, AsparagusV1_07.3448.V1.1 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G0110 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G0168 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno13g02470 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g01760 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.148 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013080 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.2324, BH09.2522, CH09.2759 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0303610, gene-QOZ80_4BG0334500 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0195140.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_046339 |
| Poaceae | Oryza coarctata | 2 | Oco07G016190, Oco08G015690 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g52890.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G232200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0301131 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr23G004600, Chr25G002920, Chr26G015830, Chr30G002870 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G784300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG065860, gene_TRIDC2BG070930 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G463500.1, TraesCS2B02G485500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb070410_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-17587, nbis-gene-22896 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g20469 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc08g07400, gene.Posoc10g05070 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_14_RagTag.942 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-16714, nbisL1-mrna-16790 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-19165, nbisL1-mrna-2120 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17248 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000025l.114 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012355 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8651 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9164 |
| Salicaceae | Populus euphratica | 1 | populus_peu00931 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132611459 |
| Tamaricaceae | Tamarix chinensis | 2 | TC06G1107, TC06G1568 |