Basic Information
Locus ID:
nbisL1-mrna-17244
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002180F_pilon | 105129 | 108478 | - | nbisL1-mrna-17244 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 105,235.09 Da | 37.88 | 98.88 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 618 | 677 | 2.8E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 379 | 418 | 2.5E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 118 | 177 | 3.3E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 236 | 258 | 0.022 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 284 | 306 | 0.37 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 834 | 911 | 1.7E-9 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 10 | 49 | 3.3E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 813 | 909 | 5.98E-20 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 105 | 706 | 4.08E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 342 | 449 | 4.65E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 454 | 7.3E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 490 | 724 | 1.0E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 212 | 322 | 3.1E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 9 | 211 | 7.7E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 794 | 906 | 6.4E-27 | - |
| SMART | SM00369 | LRR_typ_2 | 664 | 688 | 77.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 140 | 163 | 9.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 592 | 615 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 640 | 663 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 164 | 188 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 282 | 306 | 4.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 350.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 831 | 974 | 11.934056 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 642 | 665 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 837 | 859 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 640 | 653 | 5.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 408 | 421 | 5.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_021633344.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Manihot esculenta] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M9E5 | Uncharacterized protein MANES_01G096300 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology