HalophFGD

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Basic Information
Locus ID: nbisL1-mrna-17235
Species & Taxonomic ID: Rhizophora mangle & 40031
Genome Assembly: GCA_037832345.1
Description: receptor-like protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
002180F_pilon 41730 43331 - nbisL1-mrna-17235
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.30 17,765.02 Da 51.92 64.22 -0.55
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Casuarinaceae Casuarina equisetifolia 1 Ceq08G0463
Casuarinaceae Casuarina glauca 1 Cgl08G0413
Plantaginaceae Plantago ovata 1 Pov_00023687
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_6_RagTag.373, evm.TU.Scaffold_6_RagTag.389 ...
evm.TU.Scaffold_6_RagTag.390
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-15255
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-317
Rhizophoraceae Kandelia candel 1 add.evm.TU.utg000011l.100
Rhizophoraceae Kandelia obovata 1 Maker00006847
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-18378, nbisL1-mrna-21417, nbisL1-mrna-21418
Rhizophoraceae Rhizophora mangle 2 nbisL1-mrna-17235, nbisL1-mrna-22174
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.