Basic Information
Locus ID:
nbisL1-mrna-1716
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000017F_pilon | 4943422 | 4943886 | + | nbisL1-mrna-1716 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 17,543.11 Da | 57.92 | 83.57 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 154 | 154 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13160.1 | Protein kinase superfamily protein. Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase. | 0 |
| RefSeq | XP_002512892.1 | probable serine/threonine-protein kinase PBL7 isoform X2 [Ricinus communis] | 0 |
| Q9FE20 | Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana OX=3702 GN=PBS1 PE=1 SV=1 | 0 | |
| TrEMBL | B9RH33 | Receptor serine-threonine protein kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_1446790 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-2522 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-1716 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22597 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1609 |