Basic Information
Locus ID:
nbisL1-mrna-17157
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000000F_pilon | 2381498 | 2387987 | + | nbisL1-mrna-17157 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.77 | 92,512.94 Da | 58.39 | 71.70 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 695 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 702 | - | - |
| Coils | Coil | Coil | 232 | 259 | - | - |
| Coils | Coil | Coil | 736 | 763 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27950.1 | Ring/U-Box superfamily protein. | 0 |
| RefSeq | XP_021658460.1 | uncharacterized protein LOC110648515 isoform X1 [Hevea brasiliensis] | 0 |
| TrEMBL | A0A2C9V1P9 | RING-type domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_11G153300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology