Basic Information
Locus ID:
nbisL1-mrna-17150
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
26S proteasome non-ATPase regulatory subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001624F_pilon | 1910337 | 1913464 | + | nbisL1-mrna-17150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.43 | 15,657.90 Da | 43.56 | 98.21 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 60 | 134 | 1.5E-14 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23540.1 | Mov34/MPN/PAD-1 family protein. | 0 |
| RefSeq | XP_021679677.1 | 26S proteasome non-ATPase regulatory subunit 14 homolog isoform X3 [Hevea brasiliensis] | 0 |
| Q9LT08 | 26S proteasome non-ATPase regulatory subunit 14 homolog OS=Arabidopsis thaliana OX=3702 GN=RPN11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8CCG4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-17146, nbisL1-mrna-17150 |