Basic Information
Locus ID:
nbisL1-mrna-17042
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
DnaJ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001624F_pilon | 1068179 | 1069681 | - | nbisL1-mrna-17042 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 54,964.94 Da | 59.14 | 61.96 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 64 | 117 | 1.39149E-19 | IPR001623 |
| CDD | cd15489 | PHD_SF | 190 | 237 | 0.00633144 | - |
| Pfam | PF02178 | AT hook motif | 409 | 418 | 0.18 | IPR017956 |
| Pfam | PF00226 | DnaJ domain | 64 | 125 | 1.7E-19 | IPR001623 |
| Pfam | PF02178 | AT hook motif | 330 | 339 | 0.18 | IPR017956 |
| Pfam | PF02178 | AT hook motif | 488 | 497 | 0.18 | IPR017956 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 58 | 127 | 2.36E-19 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 51 | 135 | 4.1E-20 | IPR036869 |
| SMART | SM00384 | AT_hook_2 | 329 | 341 | 3.5 | IPR017956 |
| SMART | SM00271 | dnaj_3 | 63 | 120 | 1.4E-21 | IPR001623 |
| SMART | SM00384 | AT_hook_2 | 408 | 420 | 3.5 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 487 | 499 | 3.5 | IPR017956 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 64 | 128 | 15.595292 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 105 | 124 | - | IPR018253 |
| PRINTS | PR00929 | AT-hook-like domain signature | 329 | 339 | 1.1E-5 | IPR017956 |
| PRINTS | PR00625 | DnaJ domain signature | 66 | 84 | 1.4E-9 | IPR001623 |
| PRINTS | PR00929 | AT-hook-like domain signature | 485 | 495 | 1.1E-5 | IPR017956 |
| PRINTS | PR00625 | DnaJ domain signature | 84 | 99 | 1.4E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 100 | 120 | 1.4E-9 | IPR001623 |
| PRINTS | PR00929 | AT-hook-like domain signature | 406 | 417 | 1.1E-5 | IPR017956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 178 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_021601873.2 | uncharacterized protein LOC110607111 [Manihot esculenta] | 0 |
| Q17438 | DnaJ homolog subfamily B member 1 OS=Caenorhabditis elegans OX=6239 GN=dnj-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JYL0 | Uncharacterized protein MANES_02G145200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology