Basic Information
Locus ID:
nbisL1-mrna-16934
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 2362601 | 2365021 | - | nbisL1-mrna-16934 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 73,524.22 Da | 41.66 | 80.48 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 498 | 595 | 4.7E-17 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 167 | 193 | 2.2E-5 | - |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 66 | 312 | 6.02E-21 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 478 | 591 | 1.8E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 456 | 577 | 2.0E-33 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 159 | 363 | 7.3E-23 | IPR009091 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 497 | 693 | 14.958733 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 503 | 525 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 480 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_011035941.1 | PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Populus euphratica] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U5QBD0 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Populus alba OX=43335 GN=D5086_0000111740 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology