Basic Information
Locus ID:
nbisL1-mrna-16927
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 21939818 | 21941119 | - | nbisL1-mrna-16927 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 45,868.14 Da | 39.98 | 104.99 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 143 | 203 | 1.4E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 80 | 7.5E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 101 | 404 | 3.74E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 214 | 305 | 1.3E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 161 | 2.2E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 162 | 213 | 2.3E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 317 | 398 | 7.9E-8 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 334 | 362 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 260 | 284 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 190 | 0.26 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 168 | 190 | 7.00349 | IPR001611 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_007049070.2 | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Theobroma cacao] | 0 |
| TrEMBL | A0A8X8CHB5 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_040448 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology