Basic Information
Locus ID:
nbisL1-mrna-16918
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 1841799 | 1844963 | - | nbisL1-mrna-16918 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 116,295.32 Da | 29.30 | 104.25 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 784 | 1052 | 1.95685E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 780 | 979 | 4.2E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 66 | 1.3E-11 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 757 | 1049 | 2.29E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 277 | 2.72E-48 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 296 | 670 | 2.49E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 471 | 701 | 4.4E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 470 | 1.4E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 286 | 1.0E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 192 | 4.8E-45 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 738 | 853 | 1.0E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 854 | 1053 | 5.3E-57 | - |
| SMART | SM00220 | serkin_6 | 778 | 1053 | 8.8E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 333 | 356 | 96.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 603 | 627 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 555 | 579 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 121 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 651 | 677 | 100.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 778 | 1054 | 38.94413 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 784 | 806 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 898 | 910 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 172 | 185 | 2.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 603 | 616 | 2.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_021660513.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Hevea brasiliensis] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | B9RGW3 | ATP binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1444980 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology