Basic Information
Locus ID:
nbisL1-mrna-16899
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 1097872 | 1098846 | + | nbisL1-mrna-16899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 36,588.26 Da | 41.08 | 88.49 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 71 | 316 | 6.96513E-118 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 66 | 316 | 1.5E-59 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 316 | 2.43E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 54 | 146 | 1.1E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 147 | 323 | 7.8E-62 | - |
| SMART | SM00220 | serkin_6 | 63 | 319 | 2.4E-62 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 23 | 324 | 3.4E-65 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 320 | 41.799198 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 187 | 199 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 287 | 309 | 1.6E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 243 | 265 | 1.6E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 181 | 199 | 1.6E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 224 | 234 | 1.6E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 143 | 156 | 1.6E-17 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022724407.1 | serine/threonine-protein kinase HT1-like isoform X1 [Durio zibethinus] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LRC6 | Uncharacterized protein MANES_17G046400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology