Basic Information
Locus ID:
nbisL1-mrna-16892
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 21615918 | 21620142 | - | nbisL1-mrna-16892 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 85,100.25 Da | 51.90 | 80.41 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 11 | 164 | 3.21649E-56 | - |
| CDD | cd14066 | STKc_IRAK | 469 | 729 | 2.36994E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 464 | 717 | 1.3E-41 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 12 | 140 | 4.0E-9 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 13 | 140 | 1.17E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 443 | 722 | 1.48E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 441 | 535 | 1.7E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 536 | 743 | 1.2E-50 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 2 | 161 | 1.5E-9 | IPR014729 |
| SMART | SM00220 | serkin_6 | 463 | 726 | 6.1E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 463 | 741 | 36.668556 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 581 | 593 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 738 | 761 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 737 | 761 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 208 | - | - |
| Coils | Coil | Coil | 389 | 441 | - | - |
| Coils | Coil | Coil | 329 | 349 | - | - |
| Coils | Coil | Coil | 355 | 375 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021691375.1 | - | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | B9RWX1 | ATP binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1704400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology