Basic Information
Locus ID:
nbisL1-mrna-16885
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
serine threonine-protein kinase HT1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002183F_pilon | 1090099 | 1093737 | - | nbisL1-mrna-16885 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 57,527.01 Da | 49.63 | 78.86 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 207 | 456 | 2.11343E-118 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 206 | 456 | 2.5E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 189 | 456 | 4.05E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 189 | 284 | 1.8E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 285 | 482 | 4.1E-59 | - |
| SMART | SM00220 | serkin_6 | 200 | 459 | 6.2E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 200 | 460 | 41.488251 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 324 | 336 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 427 | 449 | 1.3E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 364 | 374 | 1.3E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 383 | 405 | 1.3E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 318 | 336 | 1.3E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 280 | 293 | 1.3E-17 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 171 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021672293.1 | serine/threonine-protein kinase HT1-like [Hevea brasiliensis] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LRC4 | Uncharacterized protein MANES_17G046400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology