Basic Information
Locus ID:
nbisL1-mrna-16718
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Monogalactosyldiacylglycerol synthase 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5652063 | 5654896 | - | nbisL1-mrna-16718 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 52,549.94 Da | 38.82 | 89.00 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17507 | GT28_Beta-DGS-like | 73 | 449 | 2.8367E-138 | - |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 279 | 416 | 1.6E-10 | IPR007235 |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 84 | 252 | 7.2E-61 | IPR009695 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 74 | 450 | 1.42E-23 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 260 | 433 | 4.6E-27 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20410.1 | monogalactosyldiacylglycerol synthase 2. Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation. | 0 |
| RefSeq | XP_002530758.2 | monogalactosyldiacylglycerol synthase 2, chloroplastic [Ricinus communis] | 0 |
| O82730 | Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MGD2 PE=1 SV=1 | 0 | |
| TrEMBL | B9SXN9 | monogalactosyldiacylglycerol synthase OS=Ricinus communis OX=3988 GN=RCOM_0003390 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology