Basic Information
Locus ID:
nbisL1-mrna-167
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Serine threonine-protein kinase Cx32
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 1279518 | 1280535 | + | nbisL1-mrna-167 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.01 | 13,783.66 Da | 41.98 | 60.82 | -1.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 84 | 2.02E-6 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 105 | 5.1E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 122 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17220.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_037497338.1 | - | 0 |
| Q9SII6 | Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2K3F4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg55190 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30239250 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00020315, Pov_00020316, Pov_00020317 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g12300.1 |
| Poaceae | Zea mays | 1 | Zm00001eb031180_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-52105, nbis-gene-5555 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-167, nbisL1-mrna-23555 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015265 |