Basic Information
Locus ID:
nbisL1-mrna-16698
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5800199 | 5800712 | + | nbisL1-mrna-16698 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.41 | 9,276.50 Da | 26.89 | 100.81 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 65 | 1.6E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 72 | 9.79E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 79 | 3.0E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 86 | 9.064854 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46920.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_009788619.1 | PREDICTED: mitogen-activated protein kinase kinase kinase 12-like [Nicotiana sylvestris] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4Y7JGT8 | Protein kinase domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_006163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 11 | Sgl18095, Sgl43118, Sgl47944, Sgl54011, Sgl59343, Sgl65393 ... |
| Brassicaceae | Brassica nigra | 1 | BniB06g041570.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g06040 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.245 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-16698 |