Basic Information
Locus ID:
nbisL1-mrna-16691
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000649F_pilon | 1445172 | 1450289 | + | nbisL1-mrna-16691 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 59,575.54 Da | 39.80 | 86.58 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 52 | 310 | 1.03909E-133 | - |
| Pfam | PF13499 | EF-hand domain pair | 429 | 492 | 7.8E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 55 | 311 | 3.1E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 357 | 418 | 1.6E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 340 | 518 | 1.0E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 39 | 336 | 3.24E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 319 | 1.5E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 320 | 495 | 3.1E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 54 | 138 | 7.7E-25 | - |
| SMART | SM00220 | serkin_6 | 53 | 311 | 3.3E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 430 | 458 | 2.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 358 | 386 | 4.3E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 466 | 494 | 6.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 394 | 422 | 0.021 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 354 | 389 | 16.215025 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 311 | 46.859169 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 462 | 497 | 13.760229 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 426 | 461 | 14.959732 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 390 | 425 | 10.105932 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 59 | 82 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 367 | 379 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 439 | 451 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 475 | 487 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021620700.1 | calcium-dependent protein kinase 13 [Manihot esculenta] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LMZ4 | Calcium-dependent protein kinase 13 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology