Basic Information
Locus ID:
nbisL1-mrna-16624
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000159F_pilon | 1166331 | 1175004 | + | nbisL1-mrna-16624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 58,689.01 Da | 37.18 | 86.58 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 331 | 452 | 1.5E-8 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 85 | 124 | 1.7E-12 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 251 | 328 | 2.4E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 229 | 453 | 2.81E-37 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 85 | 236 | 5.03E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 324 | 485 | 2.0E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 84 | 189 | 7.2E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 220 | 323 | 6.6E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 250 | 535 | 10.054235 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 256 | 278 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021667212.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X4 [Hevea brasiliensis] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067KRL7 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_04090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology