Basic Information
Locus ID:
nbisL1-mrna-16623
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000649F_pilon | 1055192 | 1059166 | - | nbisL1-mrna-16623 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 41,295.03 Da | 41.41 | 87.48 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 57 | 312 | 1.06507E-118 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 53 | 312 | 5.9E-58 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 50 | 327 | 9.17E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 39 | 130 | 1.7E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 135 | 333 | 1.6E-55 | - |
| SMART | SM00220 | serkin_6 | 51 | 316 | 4.9E-71 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 51 | 316 | 44.117172 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 171 | 183 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 57 | 78 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002532865.2 | serine/threonine-protein kinase STY13 [Ricinus communis] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2L6F4 | Protein kinase atn1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology