Basic Information
Locus ID:
nbisL1-mrna-16602
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000649F_pilon | 952673 | 958378 | - | nbisL1-mrna-16602 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 76,791.70 Da | 43.32 | 90.22 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 16 | 50 | 9.4E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 133 | 192 | 6.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 497 | 562 | 1.1E-10 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 16 | 248 | 1.58E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 480 | 563 | 5.84E-19 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 220 | 319 | 1.11E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 467 | 567 | 1.5E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 15 | 175 | 3.0E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 252 | 330 | 2.2E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 251 | 1.2E-14 | IPR032675 |
| SMART | SM00219 | tyrkin_6 | 496 | 619 | 4.9E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 496 | 695 | 9.785688 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 502 | 524 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 695 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.5 | - | 0 |
| RefSeq | XP_021684347.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Hevea brasiliensis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | B9T0N7 | ATP binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0126270 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology