Basic Information
Locus ID:
nbisL1-mrna-16554
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000649F_pilon | 715647 | 716661 | + | nbisL1-mrna-16554 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 17,690.84 Da | 54.17 | 89.20 | -0.14 |
Protein Domain:
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G45440.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_022744858.1 | - | 0 |
| Q9M1G3 | Probable L-type lectin-domain containing receptor kinase I.6 OS=Arabidopsis thaliana OX=3702 GN=LECRK16 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MUC0 | Uncharacterized protein MANES_07G043600 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah001975, Ah001976 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30062370 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G0944 |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate01g31340, gene.Thate01g31360, gene.Thate06g23940 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0430540.1.CDS1 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g16670.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0704353 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G005290 |
| Poaceae | Zea mays | 1 | Zm00001eb148870_P001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16554 |