Basic Information
Locus ID:
nbisL1-mrna-16467
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000159F_pilon | 136721 | 139457 | + | nbisL1-mrna-16467 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 74,515.24 Da | 36.05 | 90.34 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 142 | 202 | 1.3E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 53 | 90 | 5.3E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 378 | 646 | 3.5E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 650 | 5.48E-48 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 240 | 1.67E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 346 | 449 | 1.7E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 214 | 253 | 4.2E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 50 | 211 | 1.7E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 450 | 664 | 7.5E-39 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 374 | 651 | 27.142239 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 649 | 664 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 649 | 678 | - | - |
| Coils | Coil | Coil | 634 | 654 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_011019962.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK [Populus euphratica] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5J649 | Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_028695 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology