HalophFGD

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Basic Information
Locus ID: nbisL1-mrna-1645
Species & Taxonomic ID: Rhizophora mangle & 40031
Genome Assembly: GCA_037832345.1
Description: inactive receptor kinase
Maps and Mapping Data
Chromosome Start End Strand ID
000150F_pilon 7237979 7256092 + nbisL1-mrna-1645
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.89 133,078.25 Da 42.33 88.33 -0.22
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14066 STKc_IRAK 933 1196 8.48182E-83 -
CDD cd06257 DnaJ 87 140 2.88574E-25 IPR001623
CDD cd10747 DnaJ_C 208 458 1.50141E-34 -
CDD cd10719 DnaJ_zf 236 300 5.09427E-26 IPR001305
Pfam PF00069 Protein kinase domain 931 1190 1.6E-38 IPR000719
Pfam PF00226 DnaJ domain 87 148 3.5E-26 IPR001623
Pfam PF00684 DnaJ central domain 236 300 8.9E-10 IPR001305
Pfam PF08263 Leucine rich repeat N-terminal domain 591 626 1.1E-8 IPR013210
Pfam PF01556 DnaJ C terminal domain 209 334 1.0E-6 IPR002939
Pfam PF13855 Leucine rich repeat 679 738 1.3E-6 IPR001611
Pfam PF01556 DnaJ C terminal domain 364 457 6.4E-18 IPR002939
SUPERFAMILY SSF57938 DnaJ/Hsp40 cysteine-rich domain 223 303 1.07E-13 IPR036410
SUPERFAMILY SSF52058 L domain-like 597 776 7.18E-32 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 931 1197 9.13E-60 IPR011009
SUPERFAMILY SSF49493 HSP40/DnaJ peptide-binding domain 384 467 1.2E-14 IPR008971
SUPERFAMILY SSF46565 Chaperone J-domain 86 188 1.57E-32 IPR036869
SUPERFAMILY SSF49493 HSP40/DnaJ peptide-binding domain 208 334 5.1E-8 IPR008971
Gene3D G3DSA:2.10.230.10 - 236 300 6.3E-32 -
Gene3D G3DSA:2.60.260.20 - 208 332 6.3E-32 -
Gene3D G3DSA:1.10.287.110 DnaJ domain 84 189 3.3E-33 IPR036869
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 592 701 2.2E-25 IPR032675
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 895 1001 3.3E-20 -
Gene3D G3DSA:2.60.260.20 - 383 474 4.0E-17 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 704 789 1.5E-15 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1002 1215 2.1E-49 -
SMART SM00271 dnaj_3 86 143 8.5E-30 IPR001623
ProSiteProfiles PS51188 Zinc finger CR-type profile. 223 305 22.362738 IPR001305
ProSiteProfiles PS50011 Protein kinase domain profile. 927 1196 33.488407 IPR000719
ProSiteProfiles PS50076 dnaJ domain profile. 87 151 23.537054 IPR001623
ProSiteProfiles PS51450 Leucine-rich repeat profile. 727 749 7.172906 IPR001611
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 933 955 - IPR017441
ProSitePatterns PS00636 Nt-dnaJ domain signature. 128 147 - IPR018253
PRINTS PR00625 DnaJ domain signature 143 162 9.3E-27 IPR001623
PRINTS PR00625 DnaJ domain signature 89 107 9.3E-27 IPR001623
PRINTS PR00625 DnaJ domain signature 123 143 9.3E-27 IPR001623
PRINTS PR00625 DnaJ domain signature 107 122 9.3E-27 IPR001623
Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 84 511 32.074234 IPR012724
MobiDBLite mobidb-lite consensus disorder prediction 1198 1212 - -
MobiDBLite mobidb-lite consensus disorder prediction 1198 1221 - -
MobiDBLite mobidb-lite consensus disorder prediction 485 505 - -
Gene Ontology
Biological Process:
GO:0006457 (protein folding) GO:0006468 (protein phosphorylation) GO:0009408 (response to heat)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding) GO:0031072 (heat shock protein binding) GO:0051082 (unfolded protein binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G48480.1 receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene 0
RefSeq XP_021647181.1 probable inactive receptor kinase RLK902 [Hevea brasiliensis] 0
Swiss-Prot Q9LP77 Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 0
TrEMBL A0A6A6MVL4 - 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 10 jg13417, jg17099, jg20012, jg25558, jg25817, jg27091, jg5143 ...
jg31036, jg39583, jg7360
Aizoaceae Mesembryanthemum crystallinum 2 gene_1156, gene_24720
Amaranthaceae Atriplex hortensis 3 Ah023589, Ah028848, Ah033325
Amaranthaceae Beta vulgaris 2 BVRB_1g005410, BVRB_2g039200
Amaranthaceae Salicornia bigelovii 4 Sbi_jg19507, Sbi_jg28953, Sbi_jg2986, Sbi_jg44057
Amaranthaceae Salicornia europaea 2 Seu_jg17898, Seu_jg6896
Amaranthaceae Suaeda aralocaspica 2 GOSA_00000942, GOSA_00010611
Amaranthaceae Suaeda glauca 4 Sgl11836, Sgl15933, Sgl64817, Sgl69279
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000013294, gene:ENSEOMG00000015178 ...
gene:ENSEOMG00000017712, gene:ENSEOMG00000033516, gene:ENSEOMG00000050042, gene:ENSEOMG00000050553
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.1AG0009760, CQ.Regalona.r1.1BG0016000 ...
CQ.Regalona.r1.2AG0007850, CQ.Regalona.r1.2BG0009230
Anacardiaceae Pistacia vera 2 pistato.v30148970, pistato.v30190180
Apiaceae Apium graveolens 7 Ag10G02909, Ag11G05065, Ag3G01039, Ag3G01056, Ag6G00588 ...
Ag7G01530, Ag7G02026
Arecaceae Cocos nucifera 5 COCNU_02G005350, COCNU_02G008470, COCNU_03G009790 ...
scaffold062488G000010, scaffold062488G000020
Arecaceae Phoenix dactylifera 4 gene-LOC103695856, gene-LOC103701099, gene-LOC103717354 ...
gene-LOC103723357
Asparagaceae Asparagus officinalis 5 AsparagusV1_03.1561.V1.1, AsparagusV1_04.50.V1.1 ...
AsparagusV1_05.2283.V1.1, AsparagusV1_06.548.V1.1, AsparagusV1_08.1259.V1.1
Asteraceae Flaveria trinervia 3 Ftri13G01034, Ftri18G26677, Ftri8G02804
Brassicaceae Arabidopsis thaliana 4 AT1G48480.1, AT3G02880.1, AT3G17840.1, AT5G16590.1
Brassicaceae Eutrema salsugineum 4 Thhalv10011300m.g.v1.0, Thhalv10012966m.g.v1.0 ...
Thhalv10020262m.g.v1.0, Thhalv10020304m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp1g35430.v2.2, Sp3g01920.v2.2, Sp3g15960.v2.2 ...
Sp6g27580.v2.2
Brassicaceae Brassica nigra 7 BniB01g046950.2N, BniB01g061510.2N, BniB02g046280.2N ...
BniB05g022580.2N, BniB07g007430.2N, BniB07g052340.2N, BniB07g061020.2N
Casuarinaceae Casuarina equisetifolia 2 Ceq03G2804, Ceq08G0627
Casuarinaceae Casuarina glauca 2 Cgl03G2958, Cgl08G0599
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno05g11540, gene.Cymno09g02460, gene.Cymno11g08540
Hydrocharitaceae Thalassia testudinum 7 gene.Thate01g10530, gene.Thate01g11630, gene.Thate02g25670 ...
gene.Thate04g21390, gene.Thate04g24080, gene.Thate05g23660, gene.Thate08g18350
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-6524
Nitrariaceae Nitraria sibirica 2 evm.TU.LG02.619, evm.TU.LG10.145
Plantaginaceae Plantago ovata 4 Pov_00019978, Pov_00019979, Pov_00021142, Pov_00033187
Plumbaginaceae Limonium bicolor 3 Lb1G02086, Lb1G02122, Lb3G16648
Poaceae Echinochloa crus-galli 6 AH01.4486, AH01.843, BH01.986, CH01.1033, CH01.5100 ...
Contig192.128
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_3AG0219010, gene-QOZ80_3AG0239310 ...
gene-QOZ80_3BG0264230, gene-QOZ80_3BG0288730
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.4HG0337200.1, HORVU.MOREX.r3.4HG0344020.1 ...
HORVU.MOREX.r3.4HG0395580.1
Poaceae Lolium multiflorum 2 gene-QYE76_062429, gene-QYE76_069729
Poaceae Oryza coarctata 4 Oco05G006810, Oco05G021720, Oco06G007030, Oco06G022490
Poaceae Oryza sativa 2 LOC_Os03g12250.1, LOC_Os03g50450.1
Poaceae Paspalum vaginatum 2 gene-BS78_01G106300, gene-BS78_01G433900
Poaceae Puccinellia tenuiflora 3 Pt_Chr0101805, Pt_Chr0101842, Pt_Chr0105032
Poaceae Sporobolus alterniflorus 8 Chr01G007030, Chr01G028160, Chr04G001090, Chr04G027030 ...
Chr07G010330, Chr07G026000, Chr12G011270, Chr12G030440
Poaceae Thinopyrum elongatum 2 Tel4E01G083300, Tel4E01G412900
Poaceae Triticum dicoccoides 4 gene_TRIDC4AG008750, gene_TRIDC4AG041730 ...
gene_TRIDC4BG007320, gene_TRIDC4BG042350
Poaceae Triticum aestivum 6 TraesCS4A02G064200.1, TraesCS4A02G267300.1 ...
TraesCS4B02G047100.1, TraesCS4B02G241500.1, TraesCS4D02G046900.1, TraesCS4D02G241100.1
Poaceae Zea mays 11 Zm00001eb054960_P001, Zm00001eb076660_P001 ...
Zm00001eb130540_P001, Zm00001eb216290_P001, Zm00001eb285120_P001, Zm00001eb305120_P001, Zm00001eb375360_P001, Zm00001eb393100_P001, Zm00001eb399890_P002, Zm00001eb399900_P002, Zm00001eb411560_P001
Poaceae Zoysia japonica 5 nbis-gene-14829, nbis-gene-15924, nbis-gene-2435 ...
nbis-gene-4035, nbis-gene-57036
Poaceae Zoysia macrostachya 4 Zma_g1753, Zma_g2953, Zma_g4125, Zma_g642
Portulacaceae Portulaca oleracea 6 evm.TU.LG01.720, evm.TU.LG04.1617, evm.TU.LG04.56 ...
evm.TU.LG05.1276, evm.TU.LG10.1282, evm.TU.LG25.6
Posidoniaceae Posidonia oceanica 4 gene.Posoc01g24600, gene.Posoc02g27890, gene.Posoc08g00570 ...
gene.Posoc08g00840
Rhizophoraceae Bruguiera sexangula 4 evm.TU.Scaffold_11_RagTag.756, evm.TU.Scaffold_3_RagTag.1872 ...
evm.TU.Scaffold_4_RagTag.683, evm.TU.Scaffold_6_RagTag.1307
Rhizophoraceae Carallia pectinifolia 3 nbisL1-mrna-14429, nbisL1-mrna-16303, nbisL1-mrna-28679
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-3256, nbisL1-mrna-4583, nbisL1-mrna-7179
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-1148, nbisL1-mrna-12364, nbisL1-mrna-1684
Rhizophoraceae Kandelia candel 3 evm.TU.utg000008l.438, evm.TU.utg000011l.852 ...
evm.TU.utg000061l.35
Rhizophoraceae Kandelia obovata 3 Maker00000169, Maker00007527, Maker00008636
Rhizophoraceae Rhizophora apiculata 4 nbisL1-mrna-13451, nbisL1-mrna-14466, nbisL1-mrna-18084 ...
nbisL1-mrna-919
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-1645, nbisL1-mrna-3927, nbisL1-mrna-8424 ...
nbisL1-mrna-8631
Salicaceae Populus euphratica 6 populus_peu02286, populus_peu02287, populus_peu09671 ...
populus_peu24853, populus_peu28222, populus_peu29687
Solanaceae Lycium barbarum 4 gene-LOC132599688, gene-LOC132614133, gene-LOC132625801 ...
gene-LOC132644365
Solanaceae Solanum chilense 4 SOLCI001789600, SOLCI002608400, SOLCI005609200 ...
SOLCI006474700
Solanaceae Solanum pennellii 4 gene-LOC107004705, gene-LOC107008537, gene-LOC107014432 ...
gene-LOC107023065
Tamaricaceae Reaumuria soongarica 2 STRG.17829_chr09_-, STRG.21656_chr08_+
Tamaricaceae Tamarix chinensis 1 TC05G1822
Zosteraceae Zostera marina 2 Zosma03g35770.v3.1, Zosma06g09330.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.