Basic Information
Locus ID:
nbisL1-mrna-16417
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000650F_pilon | 2080915 | 2084014 | + | nbisL1-mrna-16417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 19,452.36 Da | 29.44 | 95.73 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 105 | 1.55E-6 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 161 | 2.0E-5 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_050208466.1 | L-type lectin-domain containing receptor kinase VII.1-like isoform X4 [Mercurialis annua] | 0 |
| TrEMBL | A0A2P2JND2 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 5 | gene_18400, gene_18664, gene_24620, gene_3959, gene_683 |
| Apiaceae | Apium graveolens | 1 | Ag3G01124 |
| Arecaceae | Cocos nucifera | 7 | COCNU_01G004170, COCNU_01G004180, COCNU_01G004190 ... |
| Plantaginaceae | Plantago ovata | 2 | Pov_00013102, Pov_00020524 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG05.1782 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.44822.1, evm.TU.45225.1 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-12784, nbisL1-mrna-12785 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-16414, nbisL1-mrna-16417 |
| Solanaceae | Solanum chilense | 1 | SOLCI001117600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107008469, gene-LOC107014036 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.22124_chr09_-, STRG.740_chr01_- |