Basic Information
Locus ID:
nbisL1-mrna-16415
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000650F_pilon | 2074099 | 2076595 | + | nbisL1-mrna-16415 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 33,261.75 Da | 48.97 | 80.55 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 43 | 177 | 1.2E-28 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 31 | 290 | 5.4E-48 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 181 | 293 | 2.2E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 180 | 1.6E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 115 | 3.0E-17 | - |
| SMART | SM00220 | serkin_6 | 40 | 292 | 3.2E-18 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 181 | 293 | 0.12 | - |
| PIRSF | PIRSF000654 | ILK | 3 | 189 | 6.8E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 292 | 23.721811 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 152 | 164 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 67 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16590.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037491158.1 | probable serine/threonine-protein kinase PBL15 [Jatropha curcas] | 0 |
| Q9FMD7 | Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana OX=3702 GN=At5g16590 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6N316 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.44290.3 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21917 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16415 |