Basic Information
Locus ID:
nbisL1-mrna-16358
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000132F_pilon | 3729673 | 3729951 | - | nbisL1-mrna-16358 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 10,360.45 Da | 42.21 | 74.24 | -0.88 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021653374.1 | E3 ubiquitin-protein ligase RNF181 homolog [Hevea brasiliensis] | 0 |
| TrEMBL | A0A7J7FTP1 | RING-type domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_031137 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_1857 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001239 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl51942, Sgl57235 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_13_RagTag.995 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-30026 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-11142 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-16358, nbisL1-mrna-19379 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000015l.250 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00015563, Maker00018053 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-18522, nbisL1-mrna-18902 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-11609, nbisL1-mrna-20799 |
| Salicaceae | Populus euphratica | 1 | populus_peu36050 |