Basic Information
Locus ID:
nbisL1-mrna-16303
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 12931614 | 12934963 | - | nbisL1-mrna-16303 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 70,787.89 Da | 33.49 | 93.82 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 360 | 623 | 1.83108E-86 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 71 | 7.2E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 357 | 617 | 5.1E-37 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 60 | 214 | 2.34E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 358 | 619 | 7.48E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 646 | 2.9E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 142 | 4.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 327 | 428 | 3.6E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 257 | 7.4E-18 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 170 | 192 | 7.43473 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 354 | 623 | 32.739304 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 360 | 382 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 659 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_021662410.1 | - | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | B9SYE5 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology