Basic Information
Locus ID:
nbisL1-mrna-16300
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 11217921 | 11225756 | - | nbisL1-mrna-16300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 80,970.73 Da | 42.20 | 93.56 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 464 | 711 | 1.53209E-118 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 67 | 270 | 2.3E-71 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 458 | 711 | 1.1E-67 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 429 | 711 | 8.09E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 536 | 719 | 1.1E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 451 | 535 | 3.4E-34 | - |
| SMART | SM00220 | serkin_6 | 458 | 718 | 8.3E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 458 | 715 | 45.276161 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 578 | 590 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 464 | 485 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 638 | 660 | 3.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 682 | 704 | 3.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 531 | 544 | 3.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 619 | 629 | 3.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 572 | 590 | 3.1E-12 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_012089932.1 | serine/threonine-protein kinase CTR1 [Jatropha curcas] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067LKZ6 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_01524 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology