Basic Information
Locus ID:
nbisL1-mrna-1625
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Oxidation resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 16401650 | 16404889 | - | nbisL1-mrna-1625 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 37,234.15 Da | 50.95 | 67.65 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 191 | 328 | 5.6E-29 | IPR006571 |
| SMART | SM00584 | 109ultra | 165 | 329 | 3.4E-29 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 166 | 329 | 26.217503 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 149 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05590.2 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_034914640.1 | oxidation resistance protein 1 isoform X2 [Populus alba] | 0 |
| Q8N573 | Oxidation resistance protein 1 OS=Homo sapiens OX=9606 GN=OXR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A4U5QQW2 | TLDc domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000059860 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology