Basic Information
Locus ID:
nbisL1-mrna-1624
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 13532146 | 13535377 | + | nbisL1-mrna-1624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 80,892.80 Da | 39.75 | 82.80 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 20 | 208 | 9.59388E-110 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 33 | 187 | 1.0E-14 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 190 | 699 | 2.4E-238 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 11 | 219 | 9.83E-75 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 547 | 669 | 6.15E-39 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 269 | 524 | 4.1E-109 | IPR020568 |
| Gene3D | G3DSA:3.30.565.10 | - | 8 | 234 | 2.9E-96 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 268 | 436 | 1.1E-85 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 437 | 523 | 2.4E-42 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 524 | 674 | 5.7E-67 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 33 | 188 | 9.6E-10 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 704 | 1.7E-262 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 31 | 40 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 176 | 193 | 4.9E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 81 | 98 | 4.9E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 124 | 146 | 4.9E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 32 | 54 | 4.9E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 194 | 212 | 4.9E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 11 | 31 | 4.9E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 99 | 116 | 4.9E-83 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 8 | 670 | 27.320822 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 254 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 678 | 704 | - | - |
| Coils | Coil | Coil | 521 | 548 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_016713634.2 | heat shock protein 90-1 [Gossypium hirsutum] | 0 |
| P27323 | Heat shock protein 90-1 OS=Arabidopsis thaliana OX=3702 GN=HSP90-1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A5D2ZRV0 | HATPase_c domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A03G033600v1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology