Basic Information
Locus ID:
nbisL1-mrna-16223
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 12114441 | 12117026 | - | nbisL1-mrna-16223 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 43,098.08 Da | 48.46 | 80.49 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 127 | 232 | 2.1E-14 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 108 | 346 | 1.85E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 233 | 356 | 1.8E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 106 | 199 | 1.7E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 124 | 385 | 10.435852 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 130 | 153 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 78 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021640244.1 | probable receptor-like protein kinase At5g18500 [Hevea brasiliensis] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2JD26 | Putative receptor-like protein kinase At5g18500 isoform X1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology