Basic Information
Locus ID:
nbisL1-mrna-16204
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000650F_pilon | 708183 | 719277 | + | nbisL1-mrna-16204 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 154,296.41 Da | 45.49 | 100.43 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 159 | 273 | 5.49844E-5 | - |
| Pfam | PF00931 | NB-ARC domain | 302 | 411 | 8.2E-10 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 166 | 282 | 1.0E-19 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 484 | 912 | 4.93E-26 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 948 | 1323 | 2.04E-19 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 150 | 425 | 2.35E-43 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1099 | 1333 | 6.5E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 891 | 1090 | 1.3E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 331 | 414 | 1.1E-12 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 153 | 329 | 7.1E-30 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 490 | 672 | 9.3E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 678 | 881 | 7.3E-9 | IPR032675 |
| SMART | SM00382 | AAA_5 | 176 | 332 | 2.8E-6 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 179 | 194 | 1.5E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 252 | 266 | 1.5E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 364 | 378 | 1.5E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 631 | 647 | 1.5E-17 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63020.1 | Disease resistance protein (CC-NBS-LRR class) family. | 0 |
| RefSeq | XP_015576964.2 | - | 0 |
| Q8RXS5 | Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana OX=3702 GN=At5g63020 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology