Basic Information
Locus ID:
nbisL1-mrna-16177
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 11623293 | 11630080 | + | nbisL1-mrna-16177 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.34 | 87,006.12 Da | 52.74 | 70.36 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 147 | 248 | 1.68687E-12 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 516 | 762 | 1.03204E-132 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 510 | 762 | 1.4E-69 | IPR001245 |
| Pfam | PF00989 | PAS fold | 139 | 246 | 8.0E-12 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 137 | 245 | 3.14E-18 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 496 | 762 | 1.86E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 503 | 587 | 4.7E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 588 | 785 | 2.7E-66 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 148 | 253 | 2.4E-22 | - |
| SMART | SM00220 | serkin_6 | 510 | 769 | 3.8E-60 | IPR000719 |
| SMART | SM00091 | pas_2 | 138 | 204 | 1.7E-7 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 138 | 248 | 7.6E-13 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 510 | 770 | 43.891029 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 136 | 207 | 15.350498 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 629 | 641 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 733 | 755 | 1.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 584 | 597 | 1.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 670 | 680 | 1.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 623 | 641 | 1.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 689 | 711 | 1.3E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 390 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 390 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 59 | - | - |
| Coils | Coil | Coil | 7 | 34 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_002519231.1 | serine/threonine-protein kinase PITSLRE isoform X1 [Ricinus communis] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L7M7 | Serine/threonine-protein kinase CTR1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology