Basic Information
Locus ID:
nbisL1-mrna-1613
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000017F_pilon | 4250176 | 4256101 | - | nbisL1-mrna-1613 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 101,898.37 Da | 43.08 | 77.09 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00014 | CH | 45 | 140 | 1.06584E-11 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 487 | 634 | 1.4E-38 | IPR001752 |
| Pfam | PF00225 | Kinesin motor domain | 644 | 763 | 1.4E-41 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 41 | 138 | 9.2E-14 | IPR001715 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 38 | 140 | 7.46E-17 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 481 | 802 | 1.29E-98 | IPR027417 |
| Gene3D | G3DSA:1.10.418.10 | - | 36 | 141 | 6.0E-15 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 422 | 642 | 1.6E-53 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 643 | 806 | 2.8E-53 | IPR036961 |
| Gene3D | G3DSA:1.20.5.170 | - | 350 | 391 | 3.3E-7 | - |
| SMART | SM00129 | kinesin_4 | 479 | 772 | 1.1E-113 | IPR001752 |
| SMART | SM00033 | ch_5 | 41 | 136 | 1.1E-6 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 481 | 764 | 79.862862 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 39 | 141 | 16.333147 | IPR001715 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 556 | 577 | 1.8E-32 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 665 | 683 | 1.8E-32 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 714 | 735 | 1.8E-32 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 805 | 918 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 824 | 840 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 864 | - | - |
| Coils | Coil | Coil | 310 | 382 | - | - |
| Coils | Coil | Coil | 398 | 425 | - | - |
| Coils | Coil | Coil | 778 | 805 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.5 | - | 0 |
| RefSeq | XP_052303438.1 | kinesin-like protein KIN-14C [Populus trichocarpa] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2X5K8 | Kinesin-like protein KIN-14K OS=Populus deltoides OX=3696 GN=H0E87_026028 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology