Basic Information
Locus ID:
nbisL1-mrna-16043
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 10584416 | 10588476 | - | nbisL1-mrna-16043 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 48,371.25 Da | 42.83 | 102.82 | 0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 120 | 337 | 5.8E-28 | IPR006153 |
| Gene3D | G3DSA:1.20.1530.20 | - | 82 | 346 | 4.7E-8 | IPR038770 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 75 | 89 | 9.2E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 90 | 98 | 9.2E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 61 | 72 | 9.2E-9 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_002315532.3 | sodium/hydrogen exchanger 1 [Populus trichocarpa] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J5VVH9 | Na_H_Exchanger domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS2216 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology