Basic Information
Locus ID:
nbisL1-mrna-16040
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 8825218 | 8831765 | - | nbisL1-mrna-16040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 117,900.04 Da | 49.80 | 84.42 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00307 | Calponin homology (CH) domain | 41 | 139 | 1.6E-6 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 459 | 768 | 2.0E-99 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 453 | 808 | 2.66E-118 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 40 | 138 | 1.96E-13 | IPR036872 |
| Gene3D | G3DSA:1.10.418.10 | - | 35 | 143 | 3.4E-12 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 448 | 811 | 2.2E-126 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 451 | 778 | 1.5E-161 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 37 | 140 | 14.31288 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 453 | 770 | 114.051407 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 670 | 681 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 528 | 549 | 6.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 720 | 741 | 6.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 671 | 689 | 6.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 640 | 657 | 6.5E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 863 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 971 | 990 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1017 | 1052 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 829 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1003 | 1058 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 829 | 862 | - | - |
| Coils | Coil | Coil | 777 | 804 | - | - |
| Coils | Coil | Coil | 260 | 294 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.2 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_024446853.2 | kinesin-like protein KIN-14J isoform X1 [Populus trichocarpa] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JHT8 | Uncharacterized protein MANES_02G021900 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology