Basic Information
Locus ID:
nbisL1-mrna-16022
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Receptor-like cytosolic serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 10427592 | 10431112 | + | nbisL1-mrna-16022 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 59,372.19 Da | 46.92 | 83.73 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 213 | 474 | 2.6E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 191 | 474 | 9.02E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 286 | 501 | 2.2E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 184 | 283 | 3.9E-23 | - |
| SMART | SM00220 | serkin_6 | 209 | 473 | 4.0E-19 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 209 | 481 | 33.403603 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 215 | 237 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 328 | 340 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 130 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021688905.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X2 [Hevea brasiliensis] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836DS61 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology