Basic Information
Locus ID:
nbisL1-mrna-15992
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 8383349 | 8386152 | - | nbisL1-mrna-15992 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 64,174.34 Da | 48.02 | 81.46 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07707 | BTB And C-terminal Kelch | 280 | 372 | 2.4E-9 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 157 | 254 | 1.5E-13 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 456 | 567 | 6.28E-7 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 152 | 254 | 1.18E-12 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 147 | 273 | 4.5E-17 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 444 | 569 | 5.1E-5 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 274 | 387 | 1.8E-12 | - |
| SMART | SM00875 | BACK_2 | 272 | 374 | 1.7E-8 | IPR011705 |
| SMART | SM00225 | BTB_4 | 157 | 257 | 2.6E-10 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 157 | 226 | 12.949977 | IPR000210 |
| Coils | Coil | Coil | 83 | 103 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_012086784.1 | BTB/POZ domain-containing protein POB1 [Jatropha curcas] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2JC08 | Uncharacterized protein MANES_02G013900 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology