Basic Information
Locus ID:
nbisL1-mrna-1598
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Dual specificity protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 13213650 | 13220193 | + | nbisL1-mrna-1598 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 74,423.98 Da | 43.92 | 80.36 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 372 | 602 | 1.45371E-111 | - |
| CDD | cd00130 | PAS | 48 | 126 | 7.42789E-10 | IPR000014 |
| Pfam | PF00989 | PAS fold | 29 | 126 | 1.7E-9 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 368 | 606 | 6.2E-59 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 603 | 3.1E-71 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 29 | 137 | 4.01E-17 | IPR035965 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 359 | 443 | 2.3E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 623 | 1.4E-52 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 25 | 139 | 4.6E-20 | - |
| SMART | SM00220 | serkin_6 | 366 | 618 | 2.1E-41 | IPR000719 |
| SMART | SM00091 | pas_2 | 27 | 95 | 1.1E-7 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 29 | 137 | 1.0E-13 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 25 | 97 | 13.837535 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 626 | 37.290451 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 485 | 497 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 351 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.2 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_039029408.1 | serine/threonine-protein kinase EDR1-like isoform X1 [Hibiscus syriacus] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2YKM9 | Serine/threonine-protein kinase CTR1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111463pilonHSYRG00195 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology