Basic Information
Locus ID:
nbisL1-mrna-15869
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
IAA7
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 9138527 | 9141159 | - | nbisL1-mrna-15869 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 28,034.87 Da | 41.42 | 69.13 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 15 | 245 | 3.6E-84 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 128 | 235 | 5.17E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 131 | 248 | 7.9E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 136 | 236 | 22.60887 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 46 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14550.1 | indole-3-acetic acid inducible 14. IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19. | 0 |
| RefSeq | XP_052312812.1 | - | 0 |
| Q38832 | Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2JY23 | Auxin-responsive protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology