Basic Information
Locus ID:
nbisL1-mrna-15826
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000194F_pilon | 2593357 | 2595996 | - | nbisL1-mrna-15826 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 68,758.54 Da | 40.77 | 87.23 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 464 | 579 | 2.5E-11 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 126 | 379 | 1.0E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 417 | 587 | 1.66E-27 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 128 | 390 | 1.52E-39 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 171 | 404 | 4.3E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 509 | 600 | 5.7E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 409 | 506 | 2.1E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 169 | 3.0E-10 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 80 | 382 | 20.824341 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 434 | 606 | 14.987 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57710.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034890930.1 | wall-associated receptor kinase-like 22 [Populus alba] | 0 |
| Q9SVY5 | Serine/threonine-protein kinase ZRK1 OS=Arabidopsis thaliana OX=3702 GN=ZRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5NAP6 | Protein kinase domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000273620 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah031726 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl54871 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000013396 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.2AG0000610, CQ.Regalona.r1.2BG0001920 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30082680 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0421 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_15_RagTag.538, evm.TU.Scaffold_15_RagTag.541 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26696 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-15826, nbisL1-mrna-15827 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.269 |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00002464, Maker00002536, Maker00002600 |