Basic Information
Locus ID:
nbisL1-mrna-15784
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6343105 | 6345729 | + | nbisL1-mrna-15784 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 61,268.19 Da | 37.61 | 80.90 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 434 | 497 | 6.06088E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 56 | 314 | 6.94117E-137 | - |
| Pfam | PF00069 | Protein kinase domain | 57 | 315 | 2.7E-77 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 363 | 422 | 2.0E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 434 | 497 | 8.4E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 344 | 509 | 1.08E-39 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 323 | 3.1E-89 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 324 | 498 | 1.5E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 323 | 3.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 59 | 142 | 1.3E-28 | - |
| SMART | SM00054 | efh_1 | 398 | 426 | 0.64 | IPR002048 |
| SMART | SM00054 | efh_1 | 471 | 499 | 0.0022 | IPR002048 |
| SMART | SM00220 | serkin_6 | 57 | 315 | 4.1E-103 | IPR000719 |
| SMART | SM00054 | efh_1 | 362 | 390 | 1.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 434 | 462 | 1.3E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 394 | 429 | 9.324862 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 358 | 393 | 14.84815 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 315 | 50.774288 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 467 | 502 | 13.007053 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 430 | 465 | 13.592857 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 63 | 86 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 443 | 455 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 480 | 492 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 407 | 419 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 371 | 383 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_002533526.1 | calcium-dependent protein kinase 24 [Ricinus communis] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | B9T5K7 | Calcium-dependent protein kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_1008260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology