Basic Information
Locus ID:
nbisL1-mrna-15779
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001425F_pilon | 406340 | 413095 | - | nbisL1-mrna-15779 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 55,161.70 Da | 42.53 | 67.41 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 147 | 424 | 1.58817E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 145 | 421 | 3.6E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 127 | 438 | 3.46E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 121 | 226 | 7.7E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 227 | 434 | 1.8E-63 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 141 | 427 | 38.477707 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 147 | 179 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 270 | 282 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 111 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015894931.1 | serine/threonine-protein kinase PBL34-like isoform X1 [Ziziphus jujuba var. spinosa] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LNJ8 | Putative receptor-like protein kinase At5g15080 isoform X1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology