Basic Information
Locus ID:
nbisL1-mrna-15738
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 10887400 | 10893012 | - | nbisL1-mrna-15738 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 57,086.40 Da | 36.68 | 85.08 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 87 | 323 | 7.7E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 84 | 326 | 6.6E-45 | IPR011009 |
| SUPERFAMILY | SSF48452 | TPR-like | 400 | 504 | 4.56E-12 | IPR011990 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 152 | 344 | 7.1E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 46 | 150 | 5.3E-30 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 398 | 507 | 6.2E-11 | IPR011990 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 341 | 22.958576 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46570.1 | BR-signaling kinase 2. Encodes BR-signaling kinase 2 (BSK2), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized. | 0 |
| RefSeq | XP_011010377.1 | PREDICTED: probable serine/threonine-protein kinase At4g35230 [Populus euphratica] | 0 |
| Q9LS26 | Serine/threonine-protein kinase BSK2 OS=Arabidopsis thaliana OX=3702 GN=BSK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JHZ6 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg26744, jg29769 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_2096 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah016102 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g106280 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg24471, Sbi_jg8319 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg11722 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001651 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl51417, Sgl56659 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000032157, gene:ENSEOMG00000047679 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0011520 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30001040, pistato.v30028920 |
| Apiaceae | Apium graveolens | 1 | Ag1G00348 |
| Arecaceae | Cocos nucifera | 2 | COCNU_08G008220, COCNU_09G003480 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103706386, gene-LOC103714028 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1560.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri11G28123, Ftri5G20943 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G46570.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10000867m.g.v1.0, Thhalv10025008m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp2g11400.v2.2, Sp7g16120.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g063250.2N, BniB05g018370.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0479, Ceq05G0979 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G0509, Cgl05G0977 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g02150 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-3603 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.698 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00032566 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb0G38136 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.2826, BH01.3166, CH01.3401 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0117570, gene-QOZ80_2BG0171230 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0052470.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_012721 |
| Poaceae | Oryza coarctata | 2 | Oco19G010770, Oco20G010610 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g42110.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G278900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0503321 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G027230, Chr09G005710, Chr13G019190, Chr15G018410 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G331900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG028830, gene_TRIDC1BG032150 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G190200.2, TraesCS1B02G192300.3 ... |
| Poaceae | Zea mays | 2 | Zm00001eb024290_P001, Zm00001eb390580_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-54219 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g12962, Zma_g15737 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG10.755, evm.TU.LG17.761 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g00570 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_18_RagTag.150 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-28408 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-19421 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-19028 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000034l.16 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018979 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-15738 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-22920 |
| Salicaceae | Populus euphratica | 3 | populus_peu26746, populus_peu26749, populus_peu34005 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132611342, gene-LOC132645874 |
| Solanaceae | Solanum chilense | 1 | SOLCI003111900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107007861 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.16255_chr06_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G0369 |
| Zosteraceae | Zostera marina | 1 | Zosma01g02390.v3.1 |