Basic Information
Locus ID:
nbisL1-mrna-15692
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 6415335 | 6417547 | - | nbisL1-mrna-15692 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 45,479.43 Da | 52.93 | 90.05 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 222 | 331 | 1.7E-12 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 111 | 188 | 5.3E-10 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 74 | 188 | 8.0E-20 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 223 | 331 | 8.64E-25 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 65 | 112 | 1.5E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 113 | 156 | 1.4E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 360 | 2.1E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 95 | 405 | 19.439209 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24790.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021656428.1 | probable serine/threonine-protein kinase PBL7 [Hevea brasiliensis] | 0 |
| Q9LRY1 | Probable serine/threonine-protein kinase PBL25 OS=Arabidopsis thaliana OX=3702 GN=PBL25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J5C234 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_003980 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30211530 |
| Apiaceae | Apium graveolens | 1 | Ag7G02425 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G015190 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708723 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2197.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G01419 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0118 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10445 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00001039 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.65 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-16983 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13644 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11680 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.1318 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-15692 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2967 |
| Salicaceae | Populus euphratica | 1 | populus_peu14081 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132623240 |
| Solanaceae | Solanum chilense | 1 | SOLCI002961600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011150 |