Basic Information
Locus ID:
nbisL1-mrna-15684
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Receptor like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 7579796 | 7582294 | + | nbisL1-mrna-15684 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 94,294.77 Da | 51.48 | 89.90 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 519 | 794 | 1.49964E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 113 | 336 | 3.3E-41 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 518 | 790 | 3.3E-27 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 403 | 7.15E-71 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 486 | 790 | 1.64E-53 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 592 | 818 | 1.3E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 189 | 406 | 1.4E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 470 | 589 | 3.3E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 84 | 188 | 6.9E-28 | - |
| SMART | SM00220 | serkin_6 | 513 | 799 | 3.8E-10 | IPR000719 |
| SMART | SM00220 | serkin_6 | 112 | 378 | 4.4E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 112 | 423 | 36.074928 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 513 | 799 | 27.84894 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 237 | 249 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 118 | 141 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32800.1 | protein kinase family protein. | 0 |
| RefSeq | XP_002323983.1 | - | 0 |
| O48837 | Receptor like protein kinase S.2 OS=Arabidopsis thaliana OX=3702 GN=LECRKS2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2KS34 | LRR-RLK OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg12822 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_4820 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah022547 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g220560 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg59492, Sbi_jg63162 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23736 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020675 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl02845, Sgl07966 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000031007, gene:ENSEOMG00000042728 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.3BG0026570, CQ.Regalona.r1.3BG0026590 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30241300 |
| Apiaceae | Apium graveolens | 3 | Ag1G01729, Ag5G02153, Ag8G02168 |
| Arecaceae | Cocos nucifera | 1 | scaffold000335G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103697920 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_Unassigned.195.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri12G34015, Ftri17G18959 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G32800.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10016233m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g15190.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g020640.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0736 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G0783 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno04g04650, gene.Cymno05g03350 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g22860 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-4183 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.570 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00021348 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0682290, gene-QOZ80_9BG0707900 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0468050.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_003923, gene-QYE76_006513 |
| Poaceae | Oryza coarctata | 1 | Oco22G005680 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g25860.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G297600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0704991 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr16G007660, Chr17G006930 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G276500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG026750, gene_TRIDC5BG027950 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G161500.1.cds1, TraesCS5B02G159000.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb344770_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-48781 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18732 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG07.38 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g07000 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.982 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-15684 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-929 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-850 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.236 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22879 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-4375 |
| Salicaceae | Populus euphratica | 3 | populus_peu01377, populus_peu24227, populus_peu24237 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132611385 |
| Solanaceae | Solanum chilense | 1 | SOLCI002050700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107029130 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.20497_chr08_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G2155 |