halophFGD

Basic Information

Locus ID: nbisL1-mrna-15678

Species & Taxonomic ID: Rhizophora apiculata & 106626

Genome Assembly: GCA_037832385.1

Description: Belongs to the 'GDSL' lipolytic enzyme family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	6345129	6347601	+	nbisL1-mrna-15678

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.22	39,967.51 Da	33.44	95.14	0.10

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd01837	SGNH_plant_lipase_like	45	354	3.45256E-148	IPR035669
Pfam	PF00657	GDSL-like Lipase/Acylhydrolase	47	352	1.6E-36	IPR001087
SUPERFAMILY	SSF52266	SGNH hydrolase	177	359	1.06E-6	-
Gene3D	G3DSA:3.40.50.1110	SGNH hydrolase	35	363	4.9E-74	IPR036514
ProSiteProfiles	PS51257	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	25	6.0	-
ProSitePatterns	PS01098	"Lipolytic enzymes ""G-D-S-L"" family, serine active site."	47	58	-	IPR008265

Gene Ontology

Biological Process:

GO:0006629 (lipid metabolic process)

Molecular Function:

GO:0016298 (lipase activity) GO:0016788 (hydrolase activity, acting on ester bonds)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G75900.1	GDSL-like Lipase/Acylhydrolase superfamily protein.
RefSeq	XP_031276761.1	GDSL esterase/lipase EXL3-like isoform X1 [Pistacia vera]
Swiss-Prot	Q94CH6	GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana OX=3702 GN=EXL3 PE=2 SV=1
TrEMBL	V4UH61	GDSL esterase/lipase EXL3-like OS=Citrus clementina OX=85681 GN=CICLE_v10025900mg PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	11	jg11747, jg11748, jg14250, jg20236, jg22106, jg22989, jg3036 ... jg22990, jg24931, jg35727, jg6368
Aizoaceae	Mesembryanthemum crystallinum	13	gene_24132, gene_24133, gene_24134, gene_24135, gene_24136 ... gene_24322, gene_271, gene_272, gene_273, gene_7056, gene_8433, gene_8434, gene_8436
Amaranthaceae	Atriplex hortensis	8	Ah009179, Ah010577, Ah026819, Ah026820, Ah026821, Ah028132 ... Ah035355, Ah036187
Amaranthaceae	Beta vulgaris	7	BVRB_6g130150, BVRB_6g130160, BVRB_6g130190, BVRB_6g130200 ... BVRB_7g174960, BVRB_8g182190, BVRB_8g182200
Amaranthaceae	Salicornia bigelovii	17	Sbi_jg13758, Sbi_jg13760, Sbi_jg13761, Sbi_jg1883 ... Sbi_jg1884, Sbi_jg21473, Sbi_jg22344, Sbi_jg34638, Sbi_jg40012, Sbi_jg41147, Sbi_jg48957, Sbi_jg52154, Sbi_jg52155, Sbi_jg52157, Sbi_jg52159, Sbi_jg52161, Sbi_jg55338
Amaranthaceae	Salicornia europaea	9	Seu_jg1408, Seu_jg1411, Seu_jg1416, Seu_jg14325, Seu_jg16272 ... Seu_jg2876, Seu_jg9685, Seu_jg9686, Seu_jg9687
Amaranthaceae	Suaeda aralocaspica	8	GOSA_00003091, GOSA_00008860, GOSA_00014081, GOSA_00014082 ... GOSA_00017123, GOSA_00017509, GOSA_00017510, GOSA_00017511
Amaranthaceae	Suaeda glauca	14	Sgl12166, Sgl12167, Sgl17538, Sgl17539, Sgl33292, Sgl38681 ... Sgl46042, Sgl46043, Sgl50736, Sgl50737, Sgl62817, Sgl67433, Sgl73159, Sgl76705
Amaranthaceae	Chenopodium album	17	gene:ENSEOMG00000000295, gene:ENSEOMG00000000669 ... gene:ENSEOMG00000002168, gene:ENSEOMG00000002735, gene:ENSEOMG00000004906, gene:ENSEOMG00000010068, gene:ENSEOMG00000017995, gene:ENSEOMG00000019055, gene:ENSEOMG00000024513, gene:ENSEOMG00000025428, gene:ENSEOMG00000027499, gene:ENSEOMG00000035777, gene:ENSEOMG00000037738, gene:ENSEOMG00000042345, gene:ENSEOMG00000045081, gene:ENSEOMG00000047403, gene:ENSEOMG00000050885
Amaranthaceae	Chenopodium quinoa	10	CQ.Regalona.r1.1AG0021430, CQ.Regalona.r1.1BG0003020 ... CQ.Regalona.r1.1BG0020160, CQ.Regalona.r1.6AG0019710, CQ.Regalona.r1.6AG0019730, CQ.Regalona.r1.6BG0020830, CQ.Regalona.r1.7AG0001880, CQ.Regalona.r1.8AG0006210, CQ.Regalona.r1.8AG0006240, CQ.Regalona.r1.8BG0006480
Anacardiaceae	Pistacia vera	8	pistato.v30049100, pistato.v30049110, pistato.v30122670 ... pistato.v30122680, pistato.v30124020, pistato.v30170610, pistato.v30210670, pistato.v30211260
Apiaceae	Apium graveolens	5	Ag11G03931, Ag4G01835, Ag4G01836, Ag6G01044, Ag9G01584
Arecaceae	Cocos nucifera	8	COCNU_04G003810, COCNU_07G002480, COCNU_07G002660 ... COCNU_07G002670, COCNU_09G004540, COCNU_10G001700, COCNU_10G001840, scaffold034219G000020
Arecaceae	Phoenix dactylifera	6	gene-LOC103699823, gene-LOC103719249, gene-LOC103719595 ... gene-LOC103719596, gene-LOC103721152, gene-LOC108511800
Asparagaceae	Asparagus officinalis	8	AsparagusV1_02.353.V1.1, AsparagusV1_04.1068.V1.1 ... AsparagusV1_04.2078.V1.1, AsparagusV1_04.2079.V1.1, AsparagusV1_04.2084.V1.1, AsparagusV1_05.2877.V1.1, AsparagusV1_10.159.V1.1, AsparagusV1_10.181.V1.1
Asteraceae	Flaveria trinervia	12	Ftri10G27203, Ftri11G09817, Ftri12G31827, Ftri15G09417 ... Ftri17G01250, Ftri17G01595, Ftri17G12624, Ftri18G07382, Ftri5G15737, Ftri6G03649, Ftri6G05018, Ftri6G05386
Brassicaceae	Arabidopsis thaliana	21	AT1G06990.1, AT1G20120.1, AT1G20132.1, AT1G58430.1 ... AT1G58725.1, AT1G59030.1, AT1G59406.1, AT1G75880.1, AT1G75890.1, AT1G75900.1, AT2G24560.1, AT2G30220.1, AT2G30310.1, AT2G31540.1, AT2G31550.1, AT2G40250.1, AT3G14820.1, AT3G43550.1, AT3G43570.1, AT5G42170.1, AT5G45960.1
Brassicaceae	Eutrema salsugineum	16	Thhalv10000926m.g.v1.0, Thhalv10007776m.g.v1.0 ... Thhalv10007849m.g.v1.0, Thhalv10008013m.g.v1.0, Thhalv10008023m.g.v1.0, Thhalv10009433m.g.v1.0, Thhalv10017743m.g.v1.0, Thhalv10017765m.g.v1.0, Thhalv10017802m.g.v1.0, Thhalv10018728m.g.v1.0, Thhalv10018754m.g.v1.0, Thhalv10019532m.g.v1.0, Thhalv10021047m.g.v1.0, Thhalv10023563m.g.v1.0, Thhalv10023950m.g.v1.0, Thhalv10024141m.g.v1.0
Brassicaceae	Schrenkiella parvula	12	Sp1g05690.v2.2, Sp1g05700.v2.2, Sp1g17890.v2.2 ... Sp2g10840.v2.2, Sp2g21120.v2.2, Sp3g13040.v2.2, Sp4g13990.v2.2, Sp4g22580.v2.2, Sp5g31020.v2.2, Sp5g31030.v2.2, Sp7g08660.v2.2, SpUn0004_0290.v2.2
Brassicaceae	Brassica nigra	21	BniB01g005120.2N, BniB01g012660.2N, BniB01g012670.2N ... BniB01g013810.2N, BniB02g003180.2N, BniB03g008540.2N, BniB03g054630.2N, BniB03g054640.2N, BniB03g054670.2N, BniB04g011300.2N, BniB04g018600.2N, BniB04g018630.2N, BniB04g019480.2N, BniB04g034850.2N, BniB06g004580.2N, BniB06g043760.2N, BniB06g043780.2N, BniB06g048930.2N, BniB06g048960.2N, BniB07g045630.2N, BniB07g054670.2N
Casuarinaceae	Casuarina equisetifolia	8	Ceq02G1364, Ceq02G1365, Ceq03G0847, Ceq03G0848, Ceq03G0849 ... Ceq03G0851, Ceq03G0852, Ceq08G1800
Casuarinaceae	Casuarina glauca	10	Cgl02G1409, Cgl02G1410, Cgl03G0921, Cgl03G0922, Cgl03G0925 ... Cgl03G0926, Cgl03G0927, Cgl03G0929, Cgl03G0930, Cgl08G1861
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno07g05640, gene.Cymno10g09360, gene.Cymno12g04940 ... gene.Cymno14g06190
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate01g05430, gene.Thate01g05440, gene.Thate04g17850 ... gene.Thate08g19050
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-10454, nbisL1-mrna-10630, nbisL1-mrna-933
Nitrariaceae	Nitraria sibirica	7	evm.TU.LG01.2188, evm.TU.LG02.1114, evm.TU.LG02.1904 ... evm.TU.LG02.2802, evm.TU.LG06.175, evm.TU.LG06.176, evm.TU.LG12.876
Plantaginaceae	Plantago ovata	11	Pov_00001716, Pov_00002571, Pov_00011776, Pov_00011802 ... Pov_00016374, Pov_00020644, Pov_00020645, Pov_00031095, Pov_00031096, Pov_00038321, Pov_00038323
Plumbaginaceae	Limonium bicolor	19	Lb0G37161, Lb0G37436, Lb1G06128, Lb1G06129, Lb1G06132 ... Lb1G06138, Lb1G06140, Lb2G14219, Lb2G14413, Lb3G18973, Lb3G18975, Lb3G20932, Lb3G20933, Lb4G24879, Lb4G24880, Lb4G24881, Lb4G24884, Lb5G26715, Lb6G32112
Poaceae	Echinochloa crus-galli	23	AH01.1945, AH01.642, AH02.3736, AH03.2768, AH05.2090 ... AH06.1629, AH06.1632, AH07.191, BH01.2294, BH01.82, BH02.3746, BH03.2913, BH05.1913, BH05.2222, BH06.1558, BH07.4060, CH01.2394, CH03.3114, CH05.2304, CH06.1713, CH06.1716, CH06.1718, CH09.3276
Poaceae	Eleusine coracana subsp. coracana	14	gene-QOZ80_1AG0038460, gene-QOZ80_1BG0088440 ... gene-QOZ80_2AG0098470, gene-QOZ80_2AG0125540, gene-QOZ80_2BG0151940, gene-QOZ80_2BG0181210, gene-QOZ80_3AG0207490, gene-QOZ80_3BG0252520, gene-QOZ80_5AG0369940, gene-QOZ80_5BG0417550, gene-QOZ80_6AG0524470, gene-QOZ80_6AG0527910, gene-QOZ80_6BG0478020, gene-QOZ80_6BG0481920
Poaceae	Hordeum vulgare	11	HORVU.MOREX.r3.1HG0038100.1, HORVU.MOREX.r3.1HG0072170.1 ... HORVU.MOREX.r3.1HG0067340.1.CDS1, HORVU.MOREX.r3.2HG0198640.1, HORVU.MOREX.r3.3HG0303800.1, HORVU.MOREX.r3.3HG0304270.1, HORVU.MOREX.r3.5HG0537160.1, HORVU.MOREX.r3.5HG0537170.1, HORVU.MOREX.r3.6HG0539180.1.CDS1, HORVU.MOREX.r3.7HG0713200.1, HORVU.MOREX.r3.7HG0713220.1
Poaceae	Lolium multiflorum	22	gene-QYE76_007950, gene-QYE76_007956, gene-QYE76_012558 ... gene-QYE76_012559, gene-QYE76_014112, gene-QYE76_014222, gene-QYE76_014223, gene-QYE76_016623, gene-QYE76_017056, gene-QYE76_033718, gene-QYE76_033719, gene-QYE76_033721, gene-QYE76_033723, gene-QYE76_033727, gene-QYE76_037872, gene-QYE76_037966, gene-QYE76_050380, gene-QYE76_055620, gene-QYE76_055786, gene-QYE76_055820, gene-QYE76_059801, gene-QYE76_059802
Poaceae	Oryza coarctata	12	Oco01G023830, Oco02G024610, Oco02G024840, Oco04G000080 ... Oco06G030470, Oco09G011900, Oco10G011850, Oco12G009320, Oco17G010690, Oco18G010630, Oco19G004850, Oco20G004740
Poaceae	Oryza sativa	8	LOC_Os01g61200.1, LOC_Os01g61570.1, LOC_Os02g01140.1 ... LOC_Os03g64170.1, LOC_Os05g39220.1, LOC_Os06g24404.1, LOC_Os09g36880.1, LOC_Os10g30290.1
Poaceae	Paspalum vaginatum	7	gene-BS78_01G002700, gene-BS78_01G225900 ... gene-BS78_02G258300, gene-BS78_03G322700, gene-BS78_04G001700, gene-BS78_09G172400, gene-BS78_10G147000
Poaceae	Puccinellia tenuiflora	17	Pt_Chr0106803, Pt_Chr0106871, Pt_Chr0106894, Pt_Chr0106895 ... Pt_Chr0108176, Pt_Chr0200157, Pt_Chr0200180, Pt_Chr0400027, Pt_Chr0400029, Pt_Chr0400030, Pt_Chr0404095, Pt_Chr0504611, Pt_Chr0504618, Pt_Chr0601897, Pt_Chr0601920, Pt_Chr0602009, Pt_Ctg00151
Poaceae	Sporobolus alterniflorus	17	Chr02G005820, Chr04G032970, Chr05G027540, Chr06G013850 ... Chr06G036430, Chr07G031870, Chr10G004900, Chr10G014390, Chr11G007900, Chr11G014070, Chr14G007820, Chr15G014610, Chr15G027480, Chr18G011680, Chr18G011690, Chr21G008000, Chr22G006030
Poaceae	Thinopyrum elongatum	13	Tel1E01G254000, Tel1E01G477300, Tel1E01G522700 ... Tel2E01G803700, Tel3E01G556600, Tel3E01G562800, Tel5E01G885600, Tel5E01G885700, Tel6E01G014600, Tel7E01G595400, Tel7E01G595600, Tel7E01G595700, Tel7E01G595800
Poaceae	Triticum dicoccoides	26	gene_TRIDC1AG020060, gene_TRIDC1AG043830 ... gene_TRIDC1AG047910, gene_TRIDC1BG025390, gene_TRIDC1BG049650, gene_TRIDC1BG054230, gene_TRIDC2AG067400, gene_TRIDC2BG072480, gene_TRIDC3AG050150, gene_TRIDC3AG050530, gene_TRIDC3BG056390, gene_TRIDC3BG056890, gene_TRIDC4AG046410, gene_TRIDC4AG047880, gene_TRIDC4AG047890, gene_TRIDC4BG001860, gene_TRIDC5AG048340, gene_TRIDC5BG083170, gene_TRIDC5BG083180, gene_TRIDC6AG000160, gene_TRIDC6AG014570, gene_TRIDC6BG000150, gene_TRIDC6BG019940, gene_TRIDC7AG046510, gene_TRIDC7BG041170, gene_TRIDC7BG041190
Poaceae	Triticum aestivum	40	TraesCS1A02G135900.1, TraesCS1A02G295000.1 ... TraesCS1A02G322600.1.cds1, TraesCS1B02G156300.1, TraesCS1B02G304400.1, TraesCS1B02G334900.1.cds1, TraesCS1D02G138700.1, TraesCS1D02G297500.1, TraesCS1D02G322600.1.cds1, TraesCS2A02G477400.1, TraesCS2B02G500500.1, TraesCS2D02G476600.1, TraesCS3A02G348300.1, TraesCS3A02G351000.1, TraesCS3B02G380200.1, TraesCS3B02G383600.1, TraesCS3D02G341900.1, TraesCS3D02G345100.1, TraesCS4A02G303600.1.cds1, TraesCS4A02G316400.1, TraesCS4A02G316500.1, TraesCS4B02G010200.1, TraesCS5A02G327300.1.cds1, TraesCS5B02G562600.1, TraesCS5B02G562700.1, TraesCS5D02G566700.1, TraesCS5D02G566800.1, TraesCS6A02G002700.1.cds1, TraesCS6A02G111000.1, TraesCS6B02G007700.1.cds1, TraesCS6B02G139100.1, TraesCS6D02G002800.1.cds1, TraesCS7A02G339300.1, TraesCS7A02G339400.1, TraesCS7B02G250700.1, TraesCS7B02G250800.1, TraesCS7D02G346700.1, TraesCS7D02G346800.1, TraesCS7D02G346900.1, TraesCS7D02G347000.1
Poaceae	Zea mays	9	Zm00001eb047450_P001, Zm00001eb065120_P002 ... Zm00001eb210390_P001, Zm00001eb229240_P001, Zm00001eb289980_P001, Zm00001eb299930_P003, Zm00001eb331900_P001, Zm00001eb351770_P001, Zm00001eb368570_P001
Poaceae	Zoysia japonica	14	nbis-gene-14192, nbis-gene-15700, nbis-gene-16807 ... nbis-gene-21329, nbis-gene-24181, nbis-gene-31493, nbis-gene-31717, nbis-gene-35218, nbis-gene-44933, nbis-gene-44934, nbis-gene-44939, nbis-gene-48036, nbis-gene-52295, nbis-gene-55724
Poaceae	Zoysia macrostachya	11	Zma_g11453, Zma_g13293, Zma_g14, Zma_g14790, Zma_g16092 ... Zma_g19542, Zma_g2318, Zma_g27034, Zma_g29813, Zma_g31981, Zma_g32169
Portulacaceae	Portulaca oleracea	27	evm.TU.LG01.229, evm.TU.LG01.246, evm.TU.LG01.390 ... evm.TU.LG01.391, evm.TU.LG03.1511, evm.TU.LG03.1572, evm.TU.LG03.1573, evm.TU.LG04.371, evm.TU.LG04.508, evm.TU.LG04.523, evm.TU.LG05.139, evm.TU.LG05.140, evm.TU.LG05.141, evm.TU.LG05.321, evm.TU.LG10.5, evm.TU.LG12.1766, evm.TU.LG12.178, evm.TU.LG12.243, evm.TU.LG12.244, evm.TU.LG17.5, evm.TU.LG18.1420, evm.TU.LG19.1380, evm.TU.LG20.463, evm.TU.LG21.489, evm.TU.LG25.1172, evm.TU.LG25.1173, evm.TU.LG25.991
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g37440, gene.Posoc06g09180, gene.Posoc08g05510 ... gene.Posoc08g11520, gene.Posoc09g02670
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_13_RagTag.332, evm.TU.Scaffold_13_RagTag.635 ... evm.TU.Scaffold_6_RagTag.2132, evm.TU.Scaffold_7_RagTag.416
Rhizophoraceae	Carallia pectinifolia	10	nbisL1-mrna-12801, nbisL1-mrna-16399, nbisL1-mrna-16999 ... nbisL1-mrna-215, nbisL1-mrna-216, nbisL1-mrna-30432, nbisL1-mrna-30433, nbisL1-mrna-30821, nbisL1-mrna-73, nbisL1-mrna-74
Rhizophoraceae	Ceriops tagal	7	nbisL1-mrna-11881, nbisL1-mrna-13369, nbisL1-mrna-14333 ... nbisL1-mrna-17391, nbisL1-mrna-17988, nbisL1-mrna-20497, nbisL1-mrna-5609
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-13060, nbisL1-mrna-16021, nbisL1-mrna-21012 ... nbisL1-mrna-22513, nbisL1-mrna-5877
Rhizophoraceae	Kandelia candel	6	add.evm.TU.utg000010l.181, add.evm.TU.utg000015l.138 ... evm.TU.utg000002l.475, evm.TU.utg000011l.1305, evm.TU.utg000015l.200, evm.TU.utg000019l.1168
Rhizophoraceae	Kandelia obovata	5	Maker00006801, Maker00007550, Maker00011731, Maker00015303 ... Maker00015863
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-15678, nbisL1-mrna-4280, nbisL1-mrna-5895 ... nbisL1-mrna-6576, nbisL1-mrna-8765
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-15155, nbisL1-mrna-16803, nbisL1-mrna-20076 ... nbisL1-mrna-2445, nbisL1-mrna-2982
Salicaceae	Populus euphratica	6	populus_peu06626, populus_peu15385, populus_peu15386 ... populus_peu16975, populus_peu18100, populus_peu33033
Solanaceae	Lycium barbarum	18	gene-LOC132603338, gene-LOC132603830, gene-LOC132604160 ... gene-LOC132613487, gene-LOC132614367, gene-LOC132623911, gene-LOC132624939, gene-LOC132625585, gene-LOC132625595, gene-LOC132626720, gene-LOC132626792, gene-LOC132628138, gene-LOC132628139, gene-LOC132628141, gene-LOC132631014, gene-LOC132631029, gene-LOC132638467, gene-LOC132639359
Solanaceae	Solanum chilense	10	SOLCI000768500, SOLCI000768700, SOLCI000768800 ... SOLCI000768900, SOLCI003661700, SOLCI003711200, SOLCI003854800, SOLCI004330000, SOLCI005347600, SOLCI007035700
Solanaceae	Solanum pennellii	12	gene-LOC107001752, gene-LOC107005945, gene-LOC107006839 ... gene-LOC107010073, gene-LOC107015858, gene-LOC107015859, gene-LOC107017072, gene-LOC107017073, gene-LOC107017577, gene-LOC107022302, gene-LOC107030760, gene-LOC107032277
Tamaricaceae	Reaumuria soongarica	11	STRG.2495_chr01_+, STRG.31312_chr11_+, STRG.31314_chr11_+ ... gene_1123, gene_13954, gene_16266, gene_16267, gene_2866, gene_7374, gene_7376, gene_7377
Tamaricaceae	Tamarix chinensis	6	TC04G2899, TC04G2901, TC04G2904, TC07G1410, TC07G1411 ... TC09G1206
Zosteraceae	Zostera marina	3	Zosma03g21340.v3.1, Zosma03g21350.v3.1, Zosma06g25180.v3.1