Basic Information
Locus ID:
nbisL1-mrna-15632
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000194F_pilon | 1090436 | 1094564 | - | nbisL1-mrna-15632 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 73,962.91 Da | 40.04 | 92.41 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 54 | 114 | 3.3E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 238 | 504 | 1.9E-36 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 220 | 630 | 2.73E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 15 | 121 | 2.19E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 387 | 637 | 2.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 6 | 145 | 7.5E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 204 | 311 | 3.7E-35 | - |
| SMART | SM00220 | serkin_6 | 235 | 618 | 2.1E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 235 | 628 | 33.17746 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 103 | 125 | 7.249913 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 241 | 263 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 426 | 438 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 101 | 114 | 4.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 80 | 93 | 4.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_021292632.1 | protein NSP-INTERACTING KINASE 3 [Herrania umbratica] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MDC2 | Uncharacterized protein MANES_12G025900 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology