Basic Information
Locus ID:
nbisL1-mrna-15598
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001811F_pilon | 1832224 | 1836429 | + | nbisL1-mrna-15598 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 51,597.29 Da | 40.91 | 110.95 | 0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 316 | 456 | 1.5E-19 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 128 | 283 | 1.3E-20 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 157 | 298 | 2.2E-14 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 299 | 460 | 9.9E-18 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 114 | 459 | 1.3E-98 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 94 | 459 | 1.1E-115 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 69 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_015578084.1 | vacuolar cation/proton exchanger 2 isoform X1 [Ricinus communis] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | B9SEZ0 | Vacuolar cation/proton exchanger OS=Ricinus communis OX=3988 GN=RCOM_1211410 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology